372b3afd7324fcea69ddc0af724f4cd50ddeb6ae gperez2 Thu Apr 25 17:00:02 2024 -0700 Fixing paragraph indentation, refs #33251 diff --git src/hg/htdocs/goldenPath/newsarch.html src/hg/htdocs/goldenPath/newsarch.html index 63ab842..c06c05d 100755 --- src/hg/htdocs/goldenPath/newsarch.html +++ src/hg/htdocs/goldenPath/newsarch.html @@ -79,30 +79,31 @@ single-nucleotide variants genome-wide. The AbSplice score is a probability estimate of how likely aberrant splicing of some sort takes place in a given tissue. Aberrant splicing predictions for tissues that are related to disease may prove to be helpful in identifying the effector gene. The authors <a href="https://github.com/gagneurlab/absplice?tab=readme-ov-file#output" target="_blank">suggest</a> three cutoffs which are represented by color in the track.</p> <ul> <li><b><font color="#FF0000">High (red)</font></b> - <b> An AbSplice score over 0.2</b> indicates a high likelihood of aberrant splicing in at least one tissue.</li> <li><b><font color="#FF8000">Medium (orange)</font></b> - <b> A score between 0.05 and 0.2 </b> indicates a medium likelihood.</li> <li><b><font color="#0000FF">Low (blue)</font></b> - <b> A score between 0.01 and 0.05 </b> indicates a low likelihood.</li> <li><b>Scores below 0.01 are not displayed.</b></li> </ul> + <p> We would like to thank Wagner, Çelik et al., 2023 for generating and making the data publicly available. We would also like to thank Jeltje van Baren, Jairo Navarro, and Gerardo Perez for their efforts on this release.</p> <a name="032624"></a> <h2>Mar. 26, 2024 New gnomAD v4 Constraint Metrics (hg38) and gnomAD Non-cancer filter (hg19/hg38)</h2> <p> We are pleased to announce the release of the <a href="/cgi-bin/hgTrackUi?&db=hg38&g=gnomadPLI">gnomAD v4 constraint metrics</a> for human assembly hg38/GRCh38 and the addition of a non-cancer filter for the <a href="/cgi-bin/hgTrackUi?db=hg19&g=gnomadExomes">GRCh37/hg19 Exome Variants v2.1.1</a> and the <a href="/cgi-bin/hgTrackUi?db=hg38&g=gnomadGenomesVariantsV3_1_1"> hg38/GRCh38 Genome Variants v3.1.1</a> tracks.</p> <p>