dd8801fc68f0f93f889aa15436b63dbbfc13aa04
max
Mon Apr 22 17:06:03 2024 -0700
add 'in new tab' link to hgBlat output, user asked me after seven years at my poster why we never fixed this. What a life. refs #19668
diff --git src/hg/hgBlat/hgBlat.c src/hg/hgBlat/hgBlat.c
index 309b275..818f494 100644
--- src/hg/hgBlat/hgBlat.c
+++ src/hg/hgBlat/hgBlat.c
@@ -657,47 +657,61 @@
int tLen = strlen(psl->tName);
maxTChromNameSize = max(maxTChromNameSize,tLen);
}
maxQChromNameSize = max(maxQChromNameSize,5);
maxTChromNameSize = max(maxTChromNameSize,5);
printf(" ACTIONS QUERY ");
spaceOut(stdout, maxQChromNameSize - 5);
printf("SCORE START END QSIZE IDENTITY CHROM ");
spaceOut(stdout, maxTChromNameSize - 5);
printf(" STRAND START END SPAN\n");
- printf("---------------------------------------------------------------------------------------------");
+ printf("----------------------------------------------------------------------------------------------------------");
repeatCharOut(stdout, '-', maxQChromNameSize - 5);
repeatCharOut(stdout, '-', maxTChromNameSize - 5);
printf("\n");
for (psl = pslList; psl != NULL; psl = psl->next)
{
+ char *browserHelp = "Open a Genome Browser showing this match";
+ char *helpText = "Open a Genome Browser with the BLAT results, but in a new internet browser tab";
+ // XX putting SVG into C code like this is ugly. define somewhere? maybe have globals for these?
+ char *icon = "";
+
if (customText)
- printf("",
- browserUrl, psl->tName, psl->tStart + 1, psl->tEnd, database,
+ {
+ printf("browser ",
+ browserHelp, browserUrl, psl->tName, psl->tStart + 1, psl->tEnd, database,
customText, uiState, unhideTrack);
+ printf("new tab%s ",
+ helpText, browserUrl, psl->tName, psl->tStart + 1, psl->tEnd, database,
+ customText, unhideTrack, icon);
+ }
else
- printf("",
- browserUrl, psl->tName, psl->tStart + 1, psl->tEnd, database,
+ {
+ printf("browser ",
+ browserHelp, browserUrl, psl->tName, psl->tStart + 1, psl->tEnd, database,
pslName, faName, uiState, unhideTrack);
- printf("browser ");
+ printf("new tab%s ",
+ helpText, browserUrl, psl->tName, psl->tStart + 1, psl->tEnd, database,
+ pslName, faName, unhideTrack, icon);
+ }
printf("",
hgcUrl, psl->tStart, pslName, cgiEncode(faName), psl->qName, psl->tName,
psl->tStart, psl->tEnd, database, uiState);
printf("details ");
printf("%s",psl->qName);
spaceOut(stdout, maxQChromNameSize - strlen(psl->qName));
printf(" %5d %5d %5d %5d %5.1f%% ",
pslScore(psl), psl->qStart+1, psl->qEnd, psl->qSize,
100.0 - pslCalcMilliBad(psl, TRUE) * 0.1);
printf("%s",psl->tName);
spaceOut(stdout, maxTChromNameSize - strlen(psl->tName));
printf(" %-2s %9d %9d %6d",
psl->strand, psl->tStart+1, psl->tEnd,
psl->tEnd - psl->tStart);