to check last update time updateTimes.csh $db gbLoaded [defaults to dev and beta] updateTimes.csh $db gbLoaded hgwbeta hgw2 to set genbank daily updates: cd ..../makeDb/genbank/etc: align.dbs -- lists assemblies to align will create alignments for all these assemblies regardless of intent to load $machine.dbs -- lists assemblies to load on a machine. ##assemblyName will disable the load regardless of whether there are alignments to load. the load will only take place after the build has completed. the build will update a file with the build date. when the genbank process is kicked off on a machine (e.g., hgw1) it checks the date in the file with the local copy and only does the load if the dates are different. (if the build is sitll in progress, there may be alignments to load that will not get grabbed even though the dates may be different). when the load is done, the file with the new date is copied to the local machine. to put into effect on dev: cd ..../makeDb/genbank: make etc-update or: cd /cluster/data/genbank/etc cvs up -dP to put into effect on beta/rr (hgnfs1): ssh hgwbeta cd /genbank/etc cvs update to see present state of updates: ssh hgwbeta cd /genbank/etc grep mm7 *.dbs