| name: | hgNearTest |
| purpose: | Test hgNear CGI script |
| example usage: |
Weekly build: hgNearTest hgwbeta.soe.ucsc.edu/cgi-bin/hgNear log New database: Add the parameters db=XXX -repeat=100 to the command line where XXX is the new database name, something like say xenTro1. |
| parameters: |
URL - url of cgi to test logfile - path to output logfile |
| options: |
-org=Human - Restrict to Human (or Mouse, Fruitfly, etc.) -db=hg16 - Restrict to particular database -search=gene - Use selected gene -dataDir=dataDir - Use selected data dir, default /usr/local/apache/cgi-bin/hgNearData -repeat=N - Number of times to repeat test (on random genes) |
| description: | Run weekly as part of regular build, and repeatedly for new assemblies. Look for problems in the log file. |
| see also: |